query_modules/nxalg.py
Rama master · réplica de lectura del repositorio original.
import sys
import mgp
try:
import networkx as nx
import numpy # noqa E401
import scipy # noqa E401
except ImportError as import_error:
sys.stderr.write(
(
f"NOTE: Please install networkx, numpy, scipy to be able to "
f"use proxied NetworkX algorithms. E.g., CALL nxalg.pagerank(...).\n"
f"Using Python:\n{sys.version}\n"
)
)
raise import_error
# Imported last because it also depends on networkx.
from mgp_networkx import MemgraphDiGraph # noqa: E402
from mgp_networkx import MemgraphGraph, MemgraphMultiDiGraph, MemgraphMultiGraph, PropertiesDictionary
# networkx.algorithms.approximation.connectivity.node_connectivity
@mgp.read_proc
def node_connectivity(
ctx: mgp.ProcCtx,
source: mgp.Nullable[mgp.Vertex] = None,
target: mgp.Nullable[mgp.Vertex] = None,
) -> mgp.Record(connectivity=int):
return mgp.Record(connectivity=nx.node_connectivity(MemgraphMultiDiGraph(ctx=ctx), source, target))
# networkx.algorithms.assortativity.degree_assortativity_coefficient
@mgp.read_proc
def degree_assortativity_coefficient(
ctx: mgp.ProcCtx,
x: str = "out",
y: str = "in",
weight: mgp.Nullable[str] = None,
nodes: mgp.Nullable[mgp.List[mgp.Vertex]] = None,
) -> mgp.Record(assortativity=float):
return mgp.Record(
assortativity=nx.degree_assortativity_coefficient(MemgraphMultiDiGraph(ctx=ctx), x, y, weight, nodes)
)
# networkx.algorithms.asteroidal.is_at_free
@mgp.read_proc
def is_at_free(ctx: mgp.ProcCtx) -> mgp.Record(is_at_free=bool):
return mgp.Record(is_at_free=nx.is_at_free(MemgraphGraph(ctx=ctx)))
# networkx.algorithms.bipartite.basic.is_bipartite
@mgp.read_proc
def is_bipartite(ctx: mgp.ProcCtx) -> mgp.Record(is_bipartite=bool):
return mgp.Record(is_bipartite=nx.is_bipartite(MemgraphMultiDiGraph(ctx=ctx)))
# networkx.algorithms.boundary.node_boundary
@mgp.read_proc
def node_boundary(
ctx: mgp.ProcCtx,
nbunch1: mgp.List[mgp.Vertex],
nbunch2: mgp.Nullable[mgp.List[mgp.Vertex]] = None,
) -> mgp.Record(boundary=mgp.List[mgp.Vertex]):
return mgp.Record(boundary=list(nx.node_boundary(MemgraphMultiDiGraph(ctx=ctx), nbunch1, nbunch2)))
# networkx.algorithms.bridges.bridges
@mgp.read_proc
def bridges(ctx: mgp.ProcCtx, root: mgp.Nullable[mgp.Vertex] = None) -> mgp.Record(bridges=mgp.List[mgp.Edge]):
g = MemgraphMultiGraph(ctx=ctx)
return mgp.Record(bridges=[next(iter(g[u][v])) for u, v in nx.bridges(MemgraphGraph(ctx=ctx), root=root)])
# networkx.algorithms.centrality.betweenness_centrality
@mgp.read_proc
def betweenness_centrality(
ctx: mgp.ProcCtx,
k: mgp.Nullable[int] = None,
normalized: bool = True,
weight: mgp.Nullable[str] = None,
endpoints: bool = False,
seed: mgp.Nullable[int] = None,
) -> mgp.Record(node=mgp.Vertex, betweenness=mgp.Number):
return [
mgp.Record(node=n, betweenness=b)
for n, b in nx.betweenness_centrality(
MemgraphDiGraph(ctx=ctx),
k=k,
normalized=normalized,
weight=weight,
endpoints=endpoints,
seed=seed,
).items()
]
# networkx.algorithms.chains.chain_decomposition
@mgp.read_proc
def chain_decomposition(
ctx: mgp.ProcCtx, root: mgp.Nullable[mgp.Vertex] = None
) -> mgp.Record(chains=mgp.List[mgp.List[mgp.Edge]]):
g = MemgraphMultiGraph(ctx=ctx)
return mgp.Record(
chains=[[next(iter(g[u][v])) for u, v in d] for d in nx.chain_decomposition(MemgraphGraph(ctx=ctx), root=root)]
)
# networkx.algorithms.chordal.is_chordal
@mgp.read_proc
def is_chordal(ctx: mgp.ProcCtx) -> mgp.Record(is_chordal=bool):
return mgp.Record(is_chordal=nx.is_chordal(MemgraphGraph(ctx=ctx)))
# networkx.algorithms.clique.find_cliques
@mgp.read_proc
def find_cliques(
ctx: mgp.ProcCtx,
) -> mgp.Record(cliques=mgp.List[mgp.List[mgp.Vertex]]):
return mgp.Record(cliques=list(nx.find_cliques(MemgraphMultiGraph(ctx=ctx))))
# networkx.algorithms.cluster.clustering
@mgp.read_proc
def clustering(
ctx: mgp.ProcCtx,
nodes: mgp.Nullable[mgp.List[mgp.Vertex]] = None,
weight: mgp.Nullable[str] = None,
) -> mgp.Record(node=mgp.Vertex, clustering=mgp.Number):
return [
mgp.Record(node=n, clustering=c)
for n, c in nx.clustering(MemgraphDiGraph(ctx=ctx), nodes=nodes, weight=weight).items()
]
# networkx.algorithms.coloring.greedy_color
@mgp.read_proc
def greedy_color(
ctx: mgp.ProcCtx, strategy: str = "largest_first", interchange: bool = False
) -> mgp.Record(node=mgp.Vertex, color=int):
return [
mgp.Record(node=n, color=c)
for n, c in nx.greedy_color(MemgraphMultiDiGraph(ctx=ctx), strategy, interchange).items()
]
# networkx.algorithms.communicability_alg.communicability
@mgp.read_proc
def communicability(
ctx: mgp.ProcCtx,
) -> mgp.Record(node1=mgp.Vertex, node2=mgp.Vertex, communicability=mgp.Number):
return [
mgp.Record(node1=n1, node2=n2, communicability=v)
for n1, d in nx.communicability(MemgraphGraph(ctx=ctx)).items()
for n2, v in d.items()
]
# networkx.algorithms.community.kclique.k_clique_communities
@mgp.read_proc
def k_clique_communities(
ctx: mgp.ProcCtx,
k: int,
cliques: mgp.Nullable[mgp.List[mgp.List[mgp.Vertex]]] = None,
) -> mgp.Record(communities=mgp.List[mgp.List[mgp.Vertex]]):
return mgp.Record(
communities=[list(s) for s in nx.community.k_clique_communities(MemgraphMultiGraph(ctx=ctx), k, cliques)]
)
# networkx.algorithms.approximation.kcomponents.k_components
@mgp.read_proc
def k_components(
ctx: mgp.ProcCtx, density: mgp.Number = 0.95
) -> mgp.Record(k=int, components=mgp.List[mgp.List[mgp.Vertex]]):
kcomps = nx.k_components(MemgraphMultiGraph(ctx=ctx), density)
return [mgp.Record(k=k, components=[list(s) for s in comps]) for k, comps in kcomps.items()]
# networkx.algorithms.components.biconnected_components
@mgp.read_proc
def biconnected_components(
ctx: mgp.ProcCtx,
) -> mgp.Record(components=mgp.List[mgp.List[mgp.Vertex]]):
comps = nx.biconnected_components(MemgraphMultiGraph(ctx=ctx))
return mgp.Record(components=[list(s) for s in comps])
# networkx.algorithms.components.strongly_connected_components
@mgp.read_proc
def strongly_connected_components(
ctx: mgp.ProcCtx,
) -> mgp.Record(components=mgp.List[mgp.List[mgp.Vertex]]):
comps = nx.strongly_connected_components(MemgraphMultiDiGraph(ctx=ctx))
return mgp.Record(components=[list(s) for s in comps])
# networkx.algorithms.connectivity.edge_kcomponents.k_edge_components
#
# NOTE: NetworkX 2.4, algorithms/connectivity/edge_kcomponents.py:367. We create
# a *copy* of the graph because the algorithm copies the graph using
# __class__() and tries to modify it.
@mgp.read_proc
def k_edge_components(ctx: mgp.ProcCtx, k: int) -> mgp.Record(components=mgp.List[mgp.List[mgp.Vertex]]):
return mgp.Record(components=[list(s) for s in nx.k_edge_components(nx.DiGraph(MemgraphDiGraph(ctx=ctx)), k)])
# networkx.algorithms.core.core_number
@mgp.read_proc
def core_number(ctx: mgp.ProcCtx) -> mgp.Record(node=mgp.Vertex, core=mgp.Number):
return [mgp.Record(node=n, core=c) for n, c in nx.core_number(MemgraphDiGraph(ctx=ctx)).items()]
# networkx.algorithms.covering.is_edge_cover
@mgp.read_proc
def is_edge_cover(ctx: mgp.ProcCtx, cover: mgp.List[mgp.Edge]) -> mgp.Record(is_edge_cover=bool):
cover = set([(e.from_vertex, e.to_vertex) for e in cover])
return mgp.Record(is_edge_cover=nx.is_edge_cover(MemgraphMultiGraph(ctx=ctx), cover))
# networkx.algorithms.cycles.find_cycle
@mgp.read_proc
def find_cycle(
ctx: mgp.ProcCtx,
source: mgp.Nullable[mgp.List[mgp.Vertex]] = None,
orientation: mgp.Nullable[str] = None,
) -> mgp.Record(cycle=mgp.Nullable[mgp.List[mgp.Edge]]):
try:
return mgp.Record(cycle=[e for _, _, e in nx.find_cycle(MemgraphMultiDiGraph(ctx=ctx), source, orientation)])
except nx.NetworkXNoCycle:
return mgp.Record(cycle=None)
# networkx.algorithms.cycles.simple_cycles
#
# NOTE: NetworkX 2.4, algorithms/cycles.py:183. We create a *copy* of the graph
# because the algorithm copies the graph using type() and tries to pass initial
# data.
@mgp.read_proc
def simple_cycles(
ctx: mgp.ProcCtx,
) -> mgp.Record(cycles=mgp.List[mgp.List[mgp.Vertex]]):
return mgp.Record(cycles=list(nx.simple_cycles(nx.MultiDiGraph(MemgraphMultiDiGraph(ctx=ctx)).copy())))
# networkx.algorithms.cuts.node_expansion
@mgp.read_proc
def node_expansion(ctx: mgp.ProcCtx, s: mgp.List[mgp.Vertex]) -> mgp.Record(node_expansion=mgp.Number):
return mgp.Record(node_expansion=nx.node_expansion(MemgraphMultiDiGraph(ctx=ctx), set(s)))
# networkx.algorithms.dag.topological_sort
@mgp.read_proc
def topological_sort(
ctx: mgp.ProcCtx,
) -> mgp.Record(nodes=mgp.Nullable[mgp.List[mgp.Vertex]]):
return mgp.Record(nodes=list(nx.topological_sort(MemgraphMultiDiGraph(ctx=ctx))))
# networkx.algorithms.dag.ancestors
@mgp.read_proc
def ancestors(ctx: mgp.ProcCtx, source: mgp.Vertex) -> mgp.Record(ancestors=mgp.List[mgp.Vertex]):
return mgp.Record(ancestors=list(nx.ancestors(MemgraphMultiDiGraph(ctx=ctx), source)))
# networkx.algorithms.dag.descendants
@mgp.read_proc
def descendants(ctx: mgp.ProcCtx, source: mgp.Vertex) -> mgp.Record(descendants=mgp.List[mgp.Vertex]):
return mgp.Record(descendants=list(nx.descendants(MemgraphMultiDiGraph(ctx=ctx), source)))
# networkx.algorithms.distance_measures.center
#
# NOTE: Takes more parameters.
@mgp.read_proc
def center(ctx: mgp.ProcCtx) -> mgp.Record(center=mgp.List[mgp.Vertex]):
return mgp.Record(center=list(nx.center(MemgraphMultiDiGraph(ctx=ctx))))
# networkx.algorithms.distance_measures.diameter
#
# NOTE: Takes more parameters.
@mgp.read_proc
def diameter(ctx: mgp.ProcCtx) -> mgp.Record(diameter=int):
return mgp.Record(diameter=nx.diameter(MemgraphMultiDiGraph(ctx=ctx)))
# networkx.algorithms.distance_regular.is_distance_regular
@mgp.read_proc
def is_distance_regular(ctx: mgp.ProcCtx) -> mgp.Record(is_distance_regular=bool):
return mgp.Record(is_distance_regular=nx.is_distance_regular(MemgraphMultiGraph(ctx=ctx)))
# networkx.algorithms.strongly_regular.is_strongly_regular
@mgp.read_proc
def is_strongly_regular(ctx: mgp.ProcCtx) -> mgp.Record(is_strongly_regular=bool):
return mgp.Record(is_strongly_regular=nx.is_strongly_regular(MemgraphMultiGraph(ctx=ctx)))
# networkx.algorithms.dominance.dominance_frontiers
@mgp.read_proc
def dominance_frontiers(
ctx: mgp.ProcCtx,
start: mgp.Vertex,
) -> mgp.Record(node=mgp.Vertex, frontier=mgp.List[mgp.Vertex]):
return [
mgp.Record(node=n, frontier=list(f))
for n, f in nx.dominance_frontiers(MemgraphMultiDiGraph(ctx=ctx), start).items()
]
# networkx.algorithms.dominance.immediate_dominators
@mgp.read_proc
def immediate_dominators(
ctx: mgp.ProcCtx,
start: mgp.Vertex,
) -> mgp.Record(node=mgp.Vertex, dominator=mgp.Vertex):
return [
mgp.Record(node=n, dominator=d)
for n, d in nx.immediate_dominators(MemgraphMultiDiGraph(ctx=ctx), start).items()
]
# networkx.algorithms.dominating.dominating_set
@mgp.read_proc
def dominating_set(
ctx: mgp.ProcCtx,
start: mgp.Vertex,
) -> mgp.Record(dominating_set=mgp.List[mgp.Vertex]):
return mgp.Record(dominating_set=list(nx.dominating_set(MemgraphMultiDiGraph(ctx=ctx), start)))
# networkx.algorithms.efficiency_measures.local_efficiency
@mgp.read_proc
def local_efficiency(ctx: mgp.ProcCtx) -> mgp.Record(local_efficiency=float):
return mgp.Record(local_efficiency=nx.local_efficiency(MemgraphMultiGraph(ctx=ctx)))
# networkx.algorithms.efficiency_measures.global_efficiency
@mgp.read_proc
def global_efficiency(ctx: mgp.ProcCtx) -> mgp.Record(global_efficiency=float):
return mgp.Record(global_efficiency=nx.global_efficiency(MemgraphMultiGraph(ctx=ctx)))
# networkx.algorithms.euler.is_eulerian
@mgp.read_proc
def is_eulerian(ctx: mgp.ProcCtx) -> mgp.Record(is_eulerian=bool):
return mgp.Record(is_eulerian=nx.is_eulerian(MemgraphMultiDiGraph(ctx=ctx)))
# networkx.algorithms.euler.is_semieulerian
@mgp.read_proc
def is_semieulerian(ctx: mgp.ProcCtx) -> mgp.Record(is_semieulerian=bool):
return mgp.Record(is_semieulerian=nx.is_semieulerian(MemgraphMultiDiGraph(ctx=ctx)))
# networkx.algorithms.euler.has_eulerian_path
@mgp.read_proc
def has_eulerian_path(ctx: mgp.ProcCtx) -> mgp.Record(has_eulerian_path=bool):
return mgp.Record(has_eulerian_path=nx.has_eulerian_path(MemgraphMultiDiGraph(ctx=ctx)))
# networkx.algorithms.hierarchy.flow_hierarchy
@mgp.read_proc
def flow_hierarchy(ctx: mgp.ProcCtx, weight: mgp.Nullable[str] = None) -> mgp.Record(flow_hierarchy=float):
return mgp.Record(flow_hierarchy=nx.flow_hierarchy(MemgraphMultiDiGraph(ctx=ctx), weight=weight))
# networkx.algorithms.isolate.isolates
@mgp.read_proc
def isolates(ctx: mgp.ProcCtx) -> mgp.Record(isolates=mgp.List[mgp.Vertex]):
return mgp.Record(isolates=list(nx.isolates(MemgraphMultiDiGraph(ctx=ctx))))
# networkx.algorithms.isolate.is_isolate
@mgp.read_proc
def is_isolate(ctx: mgp.ProcCtx, n: mgp.Vertex) -> mgp.Record(is_isolate=bool):
return mgp.Record(is_isolate=nx.is_isolate(MemgraphMultiDiGraph(ctx=ctx), n))
# networkx.algorithms.isomorphism.is_isomorphic
@mgp.read_proc
def is_isomorphic(
ctx: mgp.ProcCtx,
nodes1: mgp.List[mgp.Vertex],
edges1: mgp.List[mgp.Edge],
nodes2: mgp.List[mgp.Vertex],
edges2: mgp.List[mgp.Edge],
) -> mgp.Record(is_isomorphic=bool):
nodes1, edges1, nodes2, edges2 = map(set, [nodes1, edges1, nodes2, edges2])
g = MemgraphMultiDiGraph(ctx=ctx)
g1 = nx.subgraph_view(g, lambda n: n in nodes1, lambda n1, n2, e: e in edges1)
g2 = nx.subgraph_view(g, lambda n: n in nodes2, lambda n1, n2, e: e in edges2)
return mgp.Record(is_isomorphic=nx.is_isomorphic(g1, g2))
# networkx.algorithms.link_analysis.pagerank_alg.pagerank
@mgp.read_proc
def pagerank(
ctx: mgp.ProcCtx,
alpha: mgp.Number = 0.85,
personalization: mgp.Nullable[str] = None,
max_iter: int = 100,
tol: mgp.Number = 1e-06,
nstart: mgp.Nullable[str] = None,
weight: mgp.Nullable[str] = "weight",
dangling: mgp.Nullable[str] = None,
) -> mgp.Record(node=mgp.Vertex, rank=float):
def to_properties_dictionary(prop):
return None if prop is None else PropertiesDictionary(ctx, prop)
pg = nx.pagerank(
MemgraphDiGraph(ctx=ctx),
alpha=alpha,
personalization=to_properties_dictionary(personalization),
max_iter=max_iter,
tol=tol,
nstart=to_properties_dictionary(nstart),
weight=weight,
dangling=to_properties_dictionary(dangling),
)
return [mgp.Record(node=k, rank=v) for k, v in pg.items()]
# networkx.algorithms.link_prediction.jaccard_coefficient
@mgp.read_proc
def jaccard_coefficient(
ctx: mgp.ProcCtx, ebunch: mgp.Nullable[mgp.List[mgp.List[mgp.Vertex]]] = None
) -> mgp.Record(u=mgp.Vertex, v=mgp.Vertex, coef=float):
return [mgp.Record(u=u, v=v, coef=c) for u, v, c in nx.jaccard_coefficient(MemgraphGraph(ctx=ctx), ebunch)]
# networkx.algorithms.lowest_common_ancestors.lowest_common_ancestor
@mgp.read_proc
def lowest_common_ancestor(
ctx: mgp.ProcCtx, node1: mgp.Vertex, node2: mgp.Vertex
) -> mgp.Record(ancestor=mgp.Nullable[mgp.Vertex]):
return mgp.Record(ancestor=nx.lowest_common_ancestor(MemgraphDiGraph(ctx=ctx), node1, node2))
# networkx.algorithms.matching.maximal_matching
@mgp.read_proc
def maximal_matching(ctx: mgp.ProcCtx) -> mgp.Record(edges=mgp.List[mgp.Edge]):
g = MemgraphMultiDiGraph(ctx=ctx)
return mgp.Record(edges=list(next(iter(g[u][v])) for u, v in nx.maximal_matching(g)))
# networkx.algorithms.planarity.check_planarity
#
# NOTE: Returns a graph.
@mgp.read_proc
def check_planarity(ctx: mgp.ProcCtx) -> mgp.Record(is_planar=bool):
return mgp.Record(is_planar=nx.check_planarity(MemgraphMultiDiGraph(ctx=ctx))[0])
# networkx.algorithms.non_randomness.non_randomness
@mgp.read_proc
def non_randomness(
ctx: mgp.ProcCtx, k: mgp.Nullable[int] = None
) -> mgp.Record(non_randomness=float, relative_non_randomness=float):
nn, rnn = nx.non_randomness(MemgraphGraph(ctx=ctx), k=k)
return mgp.Record(non_randomness=nn, relative_non_randomness=rnn)
# networkx.algorithms.reciprocity.reciprocity
@mgp.read_proc
def reciprocity(
ctx: mgp.ProcCtx, nodes: mgp.Nullable[mgp.List[mgp.Vertex]] = None
) -> mgp.Record(node=mgp.Nullable[mgp.Vertex], reciprocity=mgp.Nullable[float]):
rp = nx.reciprocity(MemgraphMultiDiGraph(ctx=ctx), nodes=nodes)
if nodes is None:
return mgp.Record(node=None, reciprocity=rp)
else:
return [mgp.Record(node=n, reciprocity=r) for n, r in rp.items()]
# networkx.algorithms.shortest_paths.generic.shortest_path
@mgp.read_proc
def shortest_path(
ctx: mgp.ProcCtx,
source: mgp.Nullable[mgp.Vertex] = None,
target: mgp.Nullable[mgp.Vertex] = None,
weight: mgp.Nullable[str] = None,
method: str = "dijkstra",
) -> mgp.Record(source=mgp.Vertex, target=mgp.Vertex, path=mgp.List[mgp.Vertex]):
sp = nx.shortest_path(
MemgraphMultiDiGraph(ctx=ctx),
source=source,
target=target,
weight=weight,
method=method,
)
if source and target:
sp = {source: {target: sp}}
elif source and not target:
sp = {source: sp}
elif not source and target:
sp = {source: {target: p} for source, p in sp.items()}
return [mgp.Record(source=s, target=t, path=p) for s, d in sp.items() for t, p in d.items()]
# networkx.algorithms.shortest_paths.generic.shortest_path_length
@mgp.read_proc
def shortest_path_length(
ctx: mgp.ProcCtx,
source: mgp.Nullable[mgp.Vertex] = None,
target: mgp.Nullable[mgp.Vertex] = None,
weight: mgp.Nullable[str] = None,
method: str = "dijkstra",
) -> mgp.Record(source=mgp.Vertex, target=mgp.Vertex, length=mgp.Number):
sp = nx.shortest_path_length(
MemgraphMultiDiGraph(ctx=ctx),
source=source,
target=target,
weight=weight,
method=method,
)
if source and target:
sp = {source: {target: sp}}
elif source and not target:
sp = {source: sp}
elif not source and target:
sp = {source: {target: l} for source, l in sp.items()}
else:
sp = dict(sp)
return [mgp.Record(source=s, target=t, length=l) for s, d in sp.items() for t, l in d.items()]
# networkx.algorithms.shortest_paths.generic.all_shortest_paths
@mgp.read_proc
def all_shortest_paths(
ctx: mgp.ProcCtx,
source: mgp.Vertex,
target: mgp.Vertex,
weight: mgp.Nullable[str] = None,
method: str = "dijkstra",
) -> mgp.Record(paths=mgp.List[mgp.List[mgp.Vertex]]):
return mgp.Record(
paths=list(
nx.all_shortest_paths(
MemgraphMultiDiGraph(ctx=ctx),
source=source,
target=target,
weight=weight,
method=method,
)
)
)
# networkx.algorithms.shortest_paths.generic.has_path
@mgp.read_proc
def has_path(ctx: mgp.ProcCtx, source: mgp.Vertex, target: mgp.Vertex) -> mgp.Record(has_path=bool):
return mgp.Record(has_path=nx.has_path(MemgraphMultiDiGraph(ctx=ctx), source, target))
# networkx.algorithms.shortest_paths.weighted.multi_source_dijkstra_path
@mgp.read_proc
def multi_source_dijkstra_path(
ctx: mgp.ProcCtx,
sources: mgp.List[mgp.Vertex],
cutoff: mgp.Nullable[int] = None,
weight: str = "weight",
) -> mgp.Record(target=mgp.Vertex, path=mgp.List[mgp.Vertex]):
return [
mgp.Record(target=t, path=p)
for t, p in nx.multi_source_dijkstra_path(
MemgraphMultiDiGraph(ctx=ctx), sources, cutoff=cutoff, weight=weight
).items()
]
# networkx.algorithms.shortest_paths.weighted.multi_source_dijkstra_path_length
@mgp.read_proc
def multi_source_dijkstra_path_length(
ctx: mgp.ProcCtx,
sources: mgp.List[mgp.Vertex],
cutoff: mgp.Nullable[int] = None,
weight: str = "weight",
) -> mgp.Record(target=mgp.Vertex, length=mgp.Number):
return [
mgp.Record(target=t, length=l)
for t, l in nx.multi_source_dijkstra_path_length(
MemgraphMultiDiGraph(ctx=ctx), sources, cutoff=cutoff, weight=weight
).items()
]
# networkx.algorithms.simple_paths.is_simple_path
@mgp.read_proc
def is_simple_path(ctx: mgp.ProcCtx, nodes: mgp.List[mgp.Vertex]) -> mgp.Record(is_simple_path=bool):
return mgp.Record(is_simple_path=nx.is_simple_path(MemgraphMultiDiGraph(ctx=ctx), nodes))
# networkx.algorithms.simple_paths.all_simple_paths
@mgp.read_proc
def all_simple_paths(
ctx: mgp.ProcCtx,
source: mgp.Vertex,
target: mgp.Vertex,
cutoff: mgp.Nullable[int] = None,
) -> mgp.Record(paths=mgp.List[mgp.List[mgp.Vertex]]):
return mgp.Record(paths=list(nx.all_simple_paths(MemgraphMultiDiGraph(ctx=ctx), source, target, cutoff=cutoff)))
# networkx.algorithms.tournament.is_tournament
@mgp.read_proc
def is_tournament(ctx: mgp.ProcCtx) -> mgp.Record(is_tournament=bool):
return mgp.Record(is_tournament=nx.tournament.is_tournament(MemgraphDiGraph(ctx=ctx)))
# networkx.algorithms.traversal.breadth_first_search.bfs_edges
@mgp.read_proc
def bfs_edges(
ctx: mgp.ProcCtx,
source: mgp.Vertex,
reverse: bool = False,
depth_limit: mgp.Nullable[int] = None,
) -> mgp.Record(edges=mgp.List[mgp.Edge]):
return mgp.Record(
edges=list(
nx.bfs_edges(
MemgraphMultiDiGraph(ctx=ctx),
source,
reverse=reverse,
depth_limit=depth_limit,
)
)
)
# networkx.algorithms.traversal.breadth_first_search.bfs_tree
@mgp.read_proc
def bfs_tree(
ctx: mgp.ProcCtx,
source: mgp.Vertex,
reverse: bool = False,
depth_limit: mgp.Nullable[int] = None,
) -> mgp.Record(tree=mgp.List[mgp.Vertex]):
return mgp.Record(
tree=list(
nx.bfs_tree(
MemgraphMultiDiGraph(ctx=ctx),
source,
reverse=reverse,
depth_limit=depth_limit,
)
)
)
# networkx.algorithms.traversal.breadth_first_search.bfs_predecessors
@mgp.read_proc
def bfs_predecessors(
ctx: mgp.ProcCtx, source: mgp.Vertex, depth_limit: mgp.Nullable[int] = None
) -> mgp.Record(node=mgp.Vertex, predecessor=mgp.Vertex):
return [
mgp.Record(node=n, predecessor=p)
for n, p in nx.bfs_predecessors(MemgraphMultiDiGraph(ctx=ctx), source, depth_limit=depth_limit)
]
# networkx.algorithms.traversal.breadth_first_search.bfs_successors
@mgp.read_proc
def bfs_successors(
ctx: mgp.ProcCtx, source: mgp.Vertex, depth_limit: mgp.Nullable[int] = None
) -> mgp.Record(node=mgp.Vertex, successors=mgp.List[mgp.Vertex]):
return [
mgp.Record(node=n, successors=s)
for n, s in nx.bfs_successors(MemgraphMultiDiGraph(ctx=ctx), source, depth_limit=depth_limit)
]
# networkx.algorithms.traversal.depth_first_search.dfs_tree
@mgp.read_proc
def dfs_tree(
ctx: mgp.ProcCtx, source: mgp.Vertex, depth_limit: mgp.Nullable[int] = None
) -> mgp.Record(tree=mgp.List[mgp.Vertex]):
return mgp.Record(tree=list(nx.dfs_tree(MemgraphMultiDiGraph(ctx=ctx), source, depth_limit=depth_limit)))
# networkx.algorithms.traversal.depth_first_search.dfs_predecessors
@mgp.read_proc
def dfs_predecessors(
ctx: mgp.ProcCtx, source: mgp.Vertex, depth_limit: mgp.Nullable[int] = None
) -> mgp.Record(node=mgp.Vertex, predecessor=mgp.Vertex):
return [
mgp.Record(node=n, predecessor=p)
for n, p in nx.dfs_predecessors(MemgraphMultiDiGraph(ctx=ctx), source, depth_limit=depth_limit).items()
]
# networkx.algorithms.traversal.depth_first_search.dfs_successors
@mgp.read_proc
def dfs_successors(
ctx: mgp.ProcCtx, source: mgp.Vertex, depth_limit: mgp.Nullable[int] = None
) -> mgp.Record(node=mgp.Vertex, successors=mgp.List[mgp.Vertex]):
return [
mgp.Record(node=n, successors=s)
for n, s in nx.dfs_successors(MemgraphMultiDiGraph(ctx=ctx), source, depth_limit=depth_limit).items()
]
# networkx.algorithms.traversal.depth_first_search.dfs_preorder_nodes
@mgp.read_proc
def dfs_preorder_nodes(
ctx: mgp.ProcCtx, source: mgp.Vertex, depth_limit: mgp.Nullable[int] = None
) -> mgp.Record(nodes=mgp.List[mgp.Vertex]):
return mgp.Record(nodes=list(nx.dfs_preorder_nodes(MemgraphMultiDiGraph(ctx=ctx), source, depth_limit=depth_limit)))
# networkx.algorithms.traversal.depth_first_search.dfs_postorder_nodes
@mgp.read_proc
def dfs_postorder_nodes(
ctx: mgp.ProcCtx, source: mgp.Vertex, depth_limit: mgp.Nullable[int] = None
) -> mgp.Record(nodes=mgp.List[mgp.Vertex]):
return mgp.Record(
nodes=list(nx.dfs_postorder_nodes(MemgraphMultiDiGraph(ctx=ctx), source, depth_limit=depth_limit))
)
# networkx.algorithms.traversal.edgebfs.edge_bfs
@mgp.read_proc
def edge_bfs(
ctx: mgp.ProcCtx,
source: mgp.Nullable[mgp.Vertex] = None,
orientation: mgp.Nullable[str] = None,
) -> mgp.Record(edges=mgp.List[mgp.Edge]):
return mgp.Record(
edges=list(e for _, _, e in nx.edge_bfs(MemgraphMultiDiGraph(ctx=ctx), source=source, orientation=orientation))
)
# networkx.algorithms.traversal.edgedfs.edge_dfs
@mgp.read_proc
def edge_dfs(
ctx: mgp.ProcCtx,
source: mgp.Nullable[mgp.Vertex] = None,
orientation: mgp.Nullable[str] = None,
) -> mgp.Record(edges=mgp.List[mgp.Edge]):
return mgp.Record(
edges=list(e for _, _, e in nx.edge_dfs(MemgraphMultiDiGraph(ctx=ctx), source=source, orientation=orientation))
)
# networkx.algorithms.tree.recognition.is_tree
@mgp.read_proc
def is_tree(ctx: mgp.ProcCtx) -> mgp.Record(is_tree=bool):
return mgp.Record(is_tree=nx.is_tree(MemgraphDiGraph(ctx=ctx)))
# networkx.algorithms.tree.recognition.is_forest
@mgp.read_proc
def is_forest(ctx: mgp.ProcCtx) -> mgp.Record(is_forest=bool):
return mgp.Record(is_forest=nx.is_forest(MemgraphDiGraph(ctx=ctx)))
# networkx.algorithms.tree.recognition.is_arborescence
@mgp.read_proc
def is_arborescence(ctx: mgp.ProcCtx) -> mgp.Record(is_arborescence=bool):
return mgp.Record(is_arborescence=nx.is_arborescence(MemgraphDiGraph(ctx=ctx)))
# networkx.algorithms.tree.recognition.is_branching
@mgp.read_proc
def is_branching(ctx: mgp.ProcCtx) -> mgp.Record(is_branching=bool):
return mgp.Record(is_branching=nx.is_branching(MemgraphDiGraph(ctx=ctx)))
# networkx.algorithms.tree.mst.minimum_spanning_tree
@mgp.read_proc
def minimum_spanning_tree(
ctx: mgp.ProcCtx,
weight: str = "weight",
algorithm: str = "kruskal",
ignore_nan: bool = False,
) -> mgp.Record(nodes=mgp.List[mgp.Vertex], edges=mgp.List[mgp.Edge]):
gres = nx.minimum_spanning_tree(MemgraphMultiGraph(ctx=ctx), weight, algorithm, ignore_nan)
return mgp.Record(nodes=list(gres.nodes()), edges=[e for _, _, e in gres.edges(keys=True)])
# networkx.algorithms.triads.triadic_census
@mgp.read_proc
def triadic_census(ctx: mgp.ProcCtx) -> mgp.Record(triad=str, count=int):
return [mgp.Record(triad=t, count=c) for t, c in nx.triadic_census(MemgraphDiGraph(ctx=ctx)).items()]
# networkx.algorithms.voronoi.voronoi_cells
@mgp.read_proc
def voronoi_cells(
ctx: mgp.ProcCtx, center_nodes: mgp.List[mgp.Vertex], weight: str = "weight"
) -> mgp.Record(center=mgp.Vertex, cell=mgp.List[mgp.Vertex]):
return [
mgp.Record(center=c1, cell=list(c2))
for c1, c2 in nx.voronoi_cells(MemgraphMultiDiGraph(ctx=ctx), center_nodes, weight=weight).items()
]
# networkx.algorithms.wiener.wiener_index
@mgp.read_proc
def wiener_index(ctx: mgp.ProcCtx, weight: mgp.Nullable[str] = None) -> mgp.Record(wiener_index=mgp.Number):
return mgp.Record(wiener_index=nx.wiener_index(MemgraphMultiDiGraph(ctx=ctx), weight=weight))
@mgp.read_proc
def weakly_connected_components_subgraph(
vertices: mgp.List[mgp.Vertex], edges: mgp.List[mgp.Edge]
) -> mgp.Record(n_components=int, components=mgp.List[mgp.List[mgp.Vertex]]):
"""
This procedure finds weakly connected components of a given subgraph of a
directed graph.
The subgraph is defined by a list of vertices and a list edges which are
passed as arguments of the procedure. More precisely, a set of vertices of
a subgraph contains all vertices provided in a list of vertices along with
all vertices that are endpoints of provided edges. Similarly, a set of
edges of a subgraph contains all edges from the list of provided edges.
The procedure returns 2 fields:
* `n_components` is the number of weakly connected components of the
subgraph.
* `components` is a list of weakly connected components. Each component
is given as a list of `mgp.Vertex` objects from that component.
For example, weakly connected components in a subgraph formed from all
vertices labeled `Person` and edges between such vertices can be obtained
using the following openCypher query:
MATCH (n:Person)-[e]->(m:Person)
WITH collect(n) AS nodes, collect(e) AS edges
CALL nxalg.weakly_connected_components_subgraph(nodes, edges) YIELD *
RETURN n_components, components;
"""
g = nx.DiGraph()
g.add_nodes_from(vertices)
g.add_edges_from([(edge.from_vertex, edge.to_vertex) for edge in edges])
components = [list(wcc) for wcc in nx.weakly_connected_components(g)]
return mgp.Record(n_components=len(components), components=components)